Could I use HEK293T-KO samples as unmodified (m6A) controls for data from SQK-RNA002?

GoekeLab / xpore

Identification of differential RNA modifications from nanopore direct RNA sequencing

https://xpore.readthedocs.io/

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Could I use HEK293T-KO samples as unmodified (m6A) controls for data from SQK-RNA002? #120

Closed mantonglaw closed 2 years ago

mantonglaw commented 2 years ago

My data is from SQK-RNA002 , I notice that There is "Note that all HEK293T-KO samples can be used as unmodified (m6A) controls for any other data set generated with the same RNA kit (SQK-RNA001)" in your docs. Our samples don't have control groups, so I want to know if HEK293T-KO samples can be used as unmodified (m6A) controls for our data. Thanks in advance!