version 2.1.1 -- add ci and cDNA fasta bug fix - Githubissues

GoekeLab / xpore

Identification of differential RNA modifications from nanopore direct RNA sequencing

https://xpore.readthedocs.io/

MIT License

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version 2.1.1 -- add ci and cDNA fasta bug fix #203

Open yuukiiwa opened 7 months ago

yuukiiwa commented 7 months ago

Summary

xPore v2.1 has some minor changes from the previous version, which include the following.

Fixed a bug in dataprep, which can now handle transcriptome fasta files without transcript versions
Set up a CI workflow for automatic testing of xpore's functionalities. Currently, the CI workflow runs a pytest on testing diffmod

What's Changed

Added a CI workflow for running pytest integrated by @yuukiiwa in https://github.com/GoekeLab/xpore/pull/204
Added the first pytest testing diffmod by @yuukiiwa in https://github.com/GoekeLab/xpore/pull/202
Bug fix in readFasta() to handle transcriptome fasta without transcript versions by @loganylchen in https://github.com/GoekeLab/xpore/pull/201

New Contributors

@loganylchen made their first contribution in https://github.com/GoekeLab/xpore/pull/201