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Gr1nx-bitbit / epigentics-sim

A venture to replicate and manipulate the process of retroviruses and how they affect our body
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Change peptideSynth so that it deletes unfinished peptide sequences (Introns.cpp) #7

Closed Gr1nx-bitbit closed 2 months ago

Gr1nx-bitbit commented 2 months ago

right now, peptideSynth just returns whatever peptides it can make out of the matureRNA but it needs to return peptides that are VALID meaning they start with a start codon and end with an end codon.

Gr1nx-bitbit commented 2 months ago

Returns a hashmap of the valid sequences but doesn't discount sequences that don't have a termination codon and also doesn't add regular codons to the sequence. Fix those two things!

Gr1nx-bitbit commented 2 months ago

regular and start codons are now included and we have a way of keeping track of which peptide sequences are not terminated. for whatever reason individual nodes don't get deleted.