search

GrammarViz2 / grammarviz2_src

GrammarViz 2.0 public release:
http://grammarviz2.github.io/grammarviz2_site
GNU General Public License v2.0
120 stars 39 forks source link

RRA crashes with out of bound exception #19

Closed seninp closed 9 years ago

seninp commented 9 years ago

Something wrong with the rule intervals (last rule interval?)

10:12:50.106 [AWT-EventQueue-0] INFO e.h.j.grammarviz.view.SequiturView - 10:12:50 SAXSequitur: running RRA on the set of rule intervals... Exception in thread "AWT-EventQueue-0" java.lang.ArrayIndexOutOfBoundsException: 7500 at edu.hawaii.jmotif.sax.trie.VisitRegistry.isVisited(VisitRegistry.java:122) at edu.hawaii.jmotif.sax.SAXFactory.findBestDiscordForIntervals(SAXFactory.java:1607) at edu.hawaii.jmotif.grammarviz.logic.GrammarVizAnomalyFinder.run(GrammarVizAnomalyFinder.java:124) at edu.hawaii.jmotif.grammarviz.logic.MotifChartData.findAnomalies(MotifChartData.java:615) at edu.hawaii.jmotif.grammarviz.view.SequiturView.actionPerformed(SequiturView.java:869) at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:2022) at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2346) at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:402) at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:259) at javax.swing.plaf.basic.BasicButtonListener.mouseReleased(BasicButtonListener.java:252) at java.awt.Component.processMouseEvent(Component.java:6525) at javax.swing.JComponent.processMouseEvent(JComponent.java:3322) at java.awt.Component.processEvent(Component.java:6290) at java.awt.Container.processEvent(Container.java:2234) at java.awt.Component.dispatchEventImpl(Component.java:4881) at java.awt.Container.dispatchEventImpl(Container.java:2292) at java.awt.Component.dispatchEvent(Component.java:4703) at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4898) at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4533) at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4462) at java.awt.Container.dispatchEventImpl(Container.java:2278) at java.awt.Window.dispatchEventImpl(Window.java:2739) at java.awt.Component.dispatchEvent(Component.java:4703) at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:751) at java.awt.EventQueue.access$500(EventQueue.java:97) at java.awt.EventQueue$3.run(EventQueue.java:702) at java.awt.EventQueue$3.run(EventQueue.java:696) at java.security.AccessController.doPrivileged(Native Method) at java.security.ProtectionDomain$1.doIntersectionPrivilege(ProtectionDomain.java:75) at java.security.ProtectionDomain$1.doIntersectionPrivilege(ProtectionDomain.java:86) at java.awt.EventQueue$4.run(EventQueue.java:724) at java.awt.EventQueue$4.run(EventQueue.java:722) at java.security.AccessController.doPrivileged(Native Method) at java.security.ProtectionDomain$1.doIntersectionPrivilege(ProtectionDomain.java:75) at java.awt.EventQueue.dispatchEvent(EventQueue.java:721) at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:201) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:116) at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:105) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:101) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:93) at java.awt.EventDispatchThread.run(EventDispatchThread.java:82)