Graylab / IgFold

Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies
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how to get pre-trained weight #16

Closed maxshen29 closed 1 year ago

maxshen29 commented 1 year ago

i try to run igfold , there is no response at this step:

Downloading checkpoint files...

Is there anywhere else to download the pre-trained weights?

jeffreyruffolo commented 1 year ago

Hello, the pretrained checkpoints can be downloaded directly from here: https://data.graylab.jhu.edu/IgFold.tar.gz. After unzipping, the checkpoint paths can be provided directly to IgFoldRunner like this:

model_ckpts = ["/path/to/model1.ckpt", "/path/to/model2.ckpt", ...]
igfold = IgFoldRunner(model_ckpts= model_ckpts)
maxshen29 commented 1 year ago

thanks for your help