search

Graylab / IgFold

Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies
Other
327 stars 61 forks source link

About nanobody data #19

Closed YiningWang2 closed 1 year ago

YiningWang2 commented 1 year ago

Hello, recently, i use your nanobody test data to test the model performance on NanoBody. However, I want to get more data. So is there any way to identify if a structure is nanobody or how to get nanobody data from RCSB PDB? Thanks so much.

jeffreyruffolo commented 1 year ago

Hello, you can use the SAbDab website to do searches like this. On this page, there is an option for "Antibody type" that you can set to "VHH," which should give you all of the nanobodies from PDB.

YiningWang2 commented 1 year ago

Wow! Thanks so much for your helpful reply. And Is there any tool to identify a nanobody by protein sequence?