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GreenleafLab / ArchR

ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)
MIT License
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addArchRAnnotations() is incompatible with getPositions() #1410

Open rcorces opened 2 years ago

rcorces commented 2 years ago

Discussed in https://github.com/GreenleafLab/ArchR/discussions/1405

Originally posted by **rojinsafavi** April 27, 2022 Not sure if this is a bug, or if I am missing something here. I added "EncodeTFBS": ```projHeme2 <- addArchRAnnotations(ArchRProj = projHeme2, collection = "EncodeTFBS")``` but when I try getting the motif position, I get this error: Screen Shot 2022-04-27 at 8 08 37 PM
rcorces commented 2 years ago

Hi @rcorces! Thanks for using ArchR! Please make sure that your post belongs in the Issues section. Only bugs and error reports belong in the Issues section. Usage questions and feature requests should be posted in the Discussions section, not in Issues.
Before we help you, you must respond to the following questions unless your original post already contained this information: 1. If you've encountered an error, have you already searched previous Issues to make sure that this hasn't already been solved? 2. Can you recapitulate your error using the tutorial code and dataset? If so, provide a reproducible example. 3. Did you post your log file? If not, add it now. 4. Remove any screenshots that contain text and instead copy and paste the text using markdown's codeblock syntax (three consecutive backticks). You can do this by editing your original post.