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GreenleafLab / ArchR

ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)
MIT License
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getGroupBW error #741

Closed rojinsafavi closed 3 years ago

rojinsafavi commented 3 years ago

when I run : getGroupBW(proj_s, groupBy = 'Sample', normMethod = "None",tileSize = 100)

sometimes I get the following. It's weird since I put tileSize =100

chr2 60382600 60382800 1

rcorces commented 3 years ago

Can you create a reproducible example using the tutorial data?

rojinsafavi commented 3 years ago

I used the multiomics PBMC data, I'll try do it with the ArchR example as well

rojinsafavi commented 3 years ago

The result is the same, I read deeptools threads and it seems this is not an issue, it has to do with reducing the storage space