GuangchuangYu / enrichment4GTEx_clusterProfiler

reproduce the functional enrichment analysis presented in GTEx paper using clusterProfiler/DOSE
33 stars 16 forks source link

add clusterProfiler4 result #2

Closed huerqiang closed 3 years ago

huerqiang commented 3 years ago

老师,我把GO和KEGG重新跑的结果传上去了。新的Rmd文件放在根目录,富集结果放在cache文件夹中,跑出来的图放在GO_BP_files/figure-markdown_strict和KEGG_files/figure-markdown_strict中。 clusterProfiler原本BP显著富集结果有222个,但是我最新跑的结果只有85个。 clusterProfiler原本KEGG显著富集结果有9个,但是我最新跑的结果只有8个。 两者反而都减少了。