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GuangyuWangLab2021 / cellDancer

Predict RNA velocity through deep learning
https://guangyuwanglab2021.github.io/cellDancer_website/
BSD 3-Clause "New" or "Revised" License
60 stars 11 forks source link

Torch error #32

Open christophechu opened 2 months ago

christophechu commented 2 months ago

I think its very hard to install celldancer. Numpy is too low to install pandas

christophechu commented 2 months ago

Traceback (most recent call last): File "", line 1, in File "/data/person/wup/public/miniconda3/envs/celldancer/lib/python3.9/site-packages/celldancer/init.py", line 2, in from .velocity_estimation import velocity File "/data/person/wup/public/miniconda3/envs/celldancer/lib/python3.9/site-packages/celldancer/velocity_estimation.py", line 9, in import torch File "/data/person/wup/public/miniconda3/envs/celldancer/lib/python3.9/site-packages/torch/init.py", line 197, in from torch._C import * # noqa: F403 ImportError: /data/person/wup/public/miniconda3/envs/celldancer/lib/python3.9/site-packages/torch/lib/libtorch_cpu.so: undefined symbol: iJIT_NotifyEvent