Open gema-sanz opened 3 years ago
Input to mcl should be non-negative similarities, the only solution to this is to change your input. If you have anti-correlations that you wish to take into account, then I would suggest to simply take the absolute value, and other types of negative input may suggest other treatments (simply using a cut-off of zero being one of them). Late reply, and this is not my project (although I have worked a lot with mcl), but perhaps this is useful to someone.
Hi, When I try to set different inflation values I get this error. My adjacency matrix does not contain NA values but it has negative ones.