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GuyTeichman / RNAlysis

Analyze your RNA sequencing data without writing a single line of code
https://guyteichman.github.io/RNAlysis/
MIT License
129 stars 13 forks source link

To perform Quality control #19

Closed Rajeshwarira closed 1 year ago

Rajeshwarira commented 1 year ago

Hello Guy, I'm a beginner in bioinformatics. Can you please tell me how can I run a FastQC or other similar tools to run a quality control using RNAlysis?

(I use RNAlysis version 3.7.0 in Windows 11).

Rajeshwarira commented 1 year ago

I will be glad if you can help me with this as faster as you can sir. If the quality control option is not in RNAlysis, please do guide me what are other ways I can use sir.

GuyTeichman commented 1 year ago

Hi Rajeshwarira, Currently, FastQC is not integrated into RNAlysis. However, FastQC has a friendly graphical interface, which you can download here: https://www.bioinformatics.babraham.ac.uk/projects/fastqc/ And follow the online tutorial available here: https://www.bioinformatics.babraham.ac.uk/projects/fastqc/

Feel free to message again if you run into any issues.

Best, Guy.