HCBravoLab / metagenomeSeq

Statistical analysis for sparse high-throughput sequencing
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Package at risk for deprecation and removal from Bioconductor #92

Open lshep opened 6 months ago

lshep commented 6 months ago

We have reached out multiple times to Joseph N. Paulson . The package has been failing since December. This is very problematic as the package has multiple reverse dependencies. The package is at risk of being deprecated and removed if not fixed. Please look into the issue as soon as possible https://bioconductor.org/checkResults/release/bioc-LATEST/metagenomeSeq/ https://bioconductor.org/checkResults/devel/bioc-LATEST/metagenomeSeq/

jnpaulson commented 6 months ago

Will update today

Edit: Updated with commit 7c42a42c2ac2476ad3232fcd2baa10c7dfc4ad7d (HEAD -> devel, origin/master, origin/devel, origin/HEAD) @lshep

On Tue, Mar 12, 2024 at 06:40 lshep @.***> wrote:

We have reached out multiple times to Joseph N. Paulson . The package has been failing since December. This is very problematic as the package has multiple reverse dependencies. The package is at risk of being deprecated and removed if not fixed. Please look into the issue as soon as possible https://bioconductor.org/checkResults/release/bioc-LATEST/metagenomeSeq/ https://bioconductor.org/checkResults/devel/bioc-LATEST/metagenomeSeq/

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Daenarys8 commented 1 week ago

Hi, is there an update to this? checks are still failing. https://bioconductor.org/checkResults/devel/bioc-LATEST/metagenomeSeq/nebbiolo2-checksrc.html