HD2i / n1-simulator

Simulator for N-of-1 stochastic time-series model
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Closed zimmeee closed 5 years ago

zimmeee commented 5 years ago

ABSTRACT Background: Recent advances in molecular biology, sensors, and digital medicine have led to an explosion of products and services for high-resolution monitoring of individual health. The N-of-1 study has emerged as an important methodological tool for harnessing these new data sources, enabling researchers to compare the effectiveness of health interventions at the level of a single individual.

Objective: N-of-1 studies are susceptible to several design flaws. We developed a model that generates realistic data for N-of-1 studies to enable researchers to optimize study designs in advance.

Methods: Our stochastic time-series model simulates an N-of-1 study, incorporating all study-relevant effects, such as carryover and wash-in effects, as well as various sources of noise. The model can be used to produce realistic simulated data for a near-infinite number of N-of-1 study designs, treatment profiles, and patient characteristics.

Results: Using simulation, we demonstrate how the number of treatment blocks, ordering of treatments within blocks, duration of each treatment, and sampling frequency affect our ability to detect true differences in treatment efficacy. We provide a set of recommendations for study designs on the basis of treatment, outcomes, and instrument parameters, and make our simulation software publicly available for use by the precision medicine community.

Conclusions: Simulation can facilitate rapid optimization of N-of-1 study designs and increase the likelihood of study success while minimizing participant burden.

Cite this resource as: Percha, B., Baskerville, E. B., Johnson, M., Dudley, J. T., & Zimmerman, N. (2019). Designing Robust N-of-1 Studies for Precision Medicine: Simulation Study and Design Recommendations. Journal of medical Internet research, 21(4), e12641. link

mrjonesolmedo commented 5 years ago

Done