HITS-MCM / gromacs-ramd

Random Acceleration Molecular Dynamics in GROMACS
GNU Lesser General Public License v2.1
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Wrong ligand-receptor distance using PBC #18

Closed BerndDoser closed 3 years ago

BerndDoser commented 3 years ago

In the case the COM positions of ligand and receptor are in different periodical units, the ligand-receptor distance is too long. If the distance is larger than the half unit cell, the distance have to be corrected by the unit length.