Does ClairS-TO support the basecalling results from dorado moel "dna_r10.4.1_e8.2_400bps_hac@v5.0.0 "?

HKU-BAL / ClairS-TO

ClairS-TO - a deep-learning method for tumor-only somatic variant calling

BSD 3-Clause "New" or "Revised" License

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Does ClairS-TO support the basecalling results from dorado moel "dna_r10.4.1_e8.2_400bps_hac@v5.0.0 "? #19

Open kerenzhou062 opened 1 month ago

kerenzhou062 commented 1 month ago

Hi there,

I see the latest version for dorado is r10.4.1_e8.2_400bps_sup@v4.2.0 Does ClairS-TO support the basecalling results from dorado moel "dna_r10.4.1_e8.2_400bps_hac@v5.0.0 "?

Best,

Keren

JasonCLEI commented 4 weeks ago

Hi @kerenzhou062,

Thanks for your interest on ClairS-TO. As for your dna_r10.4.1_e8.2_400bps_hac@v5.0.0 data input, you can use the r1041_e82_400bps_sup_v420 model or the r1041_e82_400bps_hac_g657 model to have a try.

Regards, Lei