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HKU-BAL / ClairS

ClairS - a deep-learning method for long-read somatic small variant calling
BSD 3-Clause "New" or "Revised" License
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[Inquiry for train dataset generation procedure] #17

Closed quito418 closed 10 months ago

quito418 commented 11 months ago

Hi ClairS team,

Do you have plan for providing document for training dataset generation? (like in Clair3)

Thanks!

aquaskyline commented 10 months ago

Yes, but not soon because, at the moment, many validations and optimizations are going on on our sides and with our collaborators. Different from Clair3, ClairS is more clinically relevant, thus we expect to be more confident before we can release the training data-generating scripts. Nevertheless, the data generation procedures were elaborated in ClairS' preprint.

quito418 commented 10 months ago

Thank you for the reply, I look forward to it!