May I know how could I get the label files about BRCA?

HKU-MedAI / WSI-HGNN

[CVPR'23] Histopathology Whole Slide Image Analysis with Heterogeneous Graph Representation Learning

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May I know how could I get the label files about BRCA? #5

Closed chenxinli001 closed 1 year ago

chenxinli001 commented 1 year ago

May I know where could i find these two files in the project page of BRCA? i am a beginner for this project.... Or Would you mind directly share/upload these two files?

I couldn't find the desired two files from the following two pages.. Thanks!

howardchanth commented 1 year ago

I have uploaded the typing label file. For the set of WSIs with normal labels, you may check the following file from the TCGA biomedical data, there should be a column called Slide Tissue Normal. Then you just group the names of all the normal WSIs into the normal list txt file.

nationwidechildrens.org_biospecimen_sample_BRCA.txt