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HOA-2 / SubcorticalParcellations

Harvard-Oxford Atlas 2.0 Subcortical parcellations of Human Connectome Project (HCP) subjects
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Three subjects using wrong label numbers #1

Open nschmans opened 10 months ago

nschmans commented 10 months ago

In the dseg label files of the following three subjects:

192540 361941 523032

the following structures are labeled with the wrong label numbers:

Left-Inf-Lat-Vent Right-Inf-Lat-Vent Left-Hippocampus Right-Hippocampus Left-Amygdala Right-Amygdala Left-Caudate Right-Caudate Left-Putamen Right-Putamen Right-Thalamus Left-Pallidum Right-Pallidum Left-Accumbens Right-Accumbens Right-VentralDC

For example, if you look at the right hippocampus, its label number is 20, indicating left hippocampus. similarly, the left hippocampus has label number 19, indicating right inferior lateral ventricle. Discovered when comparing against the FreeSurfer aseg.mgz file created for these three subjects.

sbouix commented 10 months ago

Thanks for pointing this out. We'll fix the files and reupload asap.

sbouix commented 10 months ago

Fixed with 3ee3a59

liukai24 commented 1 week ago

Hello! It seems the fix has not been merged. I encountered the same issue on the current main branch with the same subjects.

liukai24 commented 1 week ago

An additional 192540_desg.nii.gz is found in 3ee3a59

sbouix commented 1 week ago

OK we'll look.