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HRGV / phyloFlash

phyloFlash - A pipeline to rapidly reconstruct the SSU rRNAs and explore phylogenetic composition of an illumina (meta)genomic dataset.
GNU General Public License v3.0
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--phred-offset not recognized #145

Open jianshu93 opened 3 years ago

jianshu93 commented 3 years ago

Dear phyloflash author,

when fasta file were used for spades.py assembly there was an error about not recognizing phred format. Add this line will solve the problem (most current sequncer like Miseq and Hiseq are all 33 format).

Thanks,

Jianshu