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HUPO-PSI / PEFF

Repository for the PSI Extended FASTA Format
Apache License 2.0
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Address MIAPE and PEFF #5

Closed edeutsch closed 6 years ago

edeutsch commented 6 years ago

One page 5 of the spec doc we say:

It is expected that the common sequence database format will be used to capture requirements specified in MIAPE MSI. However, the format does not enforce MIAPE compliance itself and MAY be valid and useful without being fully MIAPE compliant.

Reviewer says:

In other formats we had a mapping table between MIAPE field and XML element (http://www.psidev.info/mzidentml-conformance-miape). Is that possible here? Maybe instead of a table just one to half a dozen sentences are enough.

How shall we address this?

edeutsch commented 6 years ago

The only relevant MIAPE requirements regarding the database (aside from the fact that the database itself must be provided/identified) are the specification of the version of the database and the number of entries. Both these fields (DbName and NumberOfEntries are accommodated in PEFF).