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HUPO-PSI / mzTab

mzTab Reporting MS-based Proteomics and Metabolomics Results
https://hupo-psi.github.io/mzTab
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study_variable[1-n]_average_function and study_variable[1-n]_variation_function #118

Closed sneumann closed 6 years ago

sneumann commented 6 years ago

In https://github.com/HUPO-PSI/mzTab/blob/master/specification_document-developments/1_1-Metabolomics-Draft/mzTab_format_specification_1_1-M_draft.adoc#6242-study_variable1-n_average_function

we are looking for example terms for these functions. Candidates might come from STATO ontology or OBI:

https://www.ebi.ac.uk/ols/ontologies/stato/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FOBI_0200119 [STATO, OBI:0200119, median calculation, ]

and

https://www.ebi.ac.uk/ols/ontologies/stato/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSTATO_0000236 [STATO, STATO:0000236, coefficient of variation, ]

nilshoffmann commented 6 years ago

Looks good, we may revisit later, whether we want to include those terms as references in PSI-MS as well.