HUPO-PSI / mzTab

mzTab Reporting MS-based Proteomics and Metabolomics Results
https://hupo-psi.github.io/mzTab
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Reagent Terms in PSI-MS #14

Closed GoogleCodeExporter closed 8 years ago

GoogleCodeExporter commented 9 years ago
What steps will reproduce the problem?
1. I would be interesting to define the proper CVTerm in the PSI-MS for 
different reagent to be use for search 
    engines. This Param should be use in the metadata: 
  MTD   assay[1]-quantification_reagent 
    We can use the PRIDE Terms like http://www.ebi.ac.uk/ontology-lookup/browse.do?ontName=PRIDE&termId=PRIDE:0000433&termName=Reagents%20used%20in%20Labeled%20Methods
    but we should move some of them to PSI-MS.
2.
3.

What is the expected output? What do you see instead?

What version of the product are you using? On what operating system?

Please provide any additional information below.

Original issue reported on code.google.com by ypriverol on 16 Sep 2014 at 2:51

ypriverol commented 8 years ago

@germa can we add some of the PRIDE Terms for Quantitation to PSI-MS for example:

assay[1]-quantification_reagent