HUPO-PSI / proxi-schemas

ProXI: Schema definitions for the Proteomics eXpression Interface
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What should the compact form of /peptidoforms return? #63

Open edeutsch opened 4 years ago

edeutsch commented 4 years ago

I don't think have not specified what the compact form should return for /peptidoforms

PeptideAtlas now implements { "countDatasets": 2, "countPSM": 7, "peptidoform": "[iTRAQ]-AAHEEIC[Carbamidomethyl]TTNEGVMYR" }

good? changes? I suppose the only required field it peptidoform. Should it just be the required field peptidoform only?

http://www.peptideatlas.org/api/proxi/v0.1/peptidoforms?resultType=compact&peptideSequence=AAHEEICTTNEGVMYR

ypriverol commented 4 years ago

Name free text should UNIMOD accession.

ypriverol commented 4 years ago

Peptide probability or reliability score should be added in the full version.