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HUPO-PSI / psi-mi-CV

Molecular Interactions Controll Vocabulary
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New term: polyprotein fragment #110

Closed noedelta closed 8 years ago

noedelta commented 18 years ago

A number of viral (and some other) proteins are expressed as a product of a single gene that is later on split into individual polypeptide fragments (eg UniProt: P08411; RefSeq: NP_463457.1). To my knowledge, in some of the cases (most notably UniProt) the mature fragments do not have their individual acessions thus prohibiting the use of polyprotein entries, otherwise valid, as a crossreference. A simple solution would be to add a 'polyprotein fragment' as biological feature to be used in such cases.

Reported by: lukasz99

noedelta commented 18 years ago

Logged In: YES user_id=653048

I agree

Luisa

Original comment by: luisa_montecchi

noedelta commented 17 years ago

Logged In: YES user_id=653048

Approved at the PSI Washington meeting and added as MI:0828

Original comment by: luisa_montecchi

noedelta commented 17 years ago

Original comment by: luisa_montecchi