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HUPO-PSI / psi-mi-CV

Molecular Interactions Controll Vocabulary
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New term: fluorophore #123

Closed noedelta closed 8 years ago

noedelta commented 17 years ago

Relevant PMID: 17161370

There are cases when the fluorophore (ie the fluorescent part of a molecule) is neither an experimentaly added label/dye nor introduced through mutation - native tryptophanes are often used in such a role. 'fluorophore' term added as a child of experimental feature would allow to consistently annotate fluorescence-based experiments.

It would be also useful to create 'fluorescent dye label' term as a child of both 'dye label' and 'fluorophore' with the specific dye labels currently present in the CV moved into the new 'fluorescent dye label' category (as all of them are actually fluorescent labels)

The proposed addition/changes would make it much easier to programmatically process/analyse the results of fluorescence-basd experiemnts (FRET, in particular)

lukasz

Reported by: lukasz99

noedelta commented 17 years ago

Logged In: YES user_id=653048 Originator: NO

see MI:0856 fluorophore MI:0857 fluorescent dye label and hierarchy rearrengements

Original comment by: luisa_montecchi

noedelta commented 17 years ago

Original comment by: luisa_montecchi