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Molecular Interactions Controll Vocabulary
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Enzymatic study branch consistency updates #237

Closed noedelta closed 8 years ago

noedelta commented 14 years ago

These are actually three related issues:

1) Would it be possible to make all the terms follow the same form (-aze or -ation) ? At the moment all but few terms end with -aze. Can the rest end the same ? Or with -ation ? either way is fine, as long as it is consistent.

2) Would it be possible to remove all the references to the interactor types from the definitions (eg reference to proteins) ?

3) Would it be possible to synchronize essay names and enzymatic reactions ? there's 'phosphotransfer reaction' and 'phosphorylation reaction' but only(?) 'phosphotransfer assay'; also 'methylation reaction' but 'methyltransferase assay'

4) Would it be possible to to make nucleoside triphosphatase assay (MI:0879) a child of interactor-type-less phosphatase assay (MI:0434); the same holds for protein kinase assay (MI:0424) and phosphotransfer assay (MI:0841)

I've noticed these when looking at phosphotransfer assay (MI:0841) but there might be more.

Reported by: lukasz99

noedelta commented 14 years ago

there are actually 4 issues, not just three ;o)

Original comment by: lukasz99

noedelta commented 13 years ago

1-3 done 4 - I'd like to check with a broader audience that they are happy with this, as the phosphatase activity is only part of these processes. New term protein phosphatase assay created as part of this however.

Original comment by: orchard

noedelta commented 13 years ago

Original comment by: orchard