HUPO-PSI / psi-mi-CV

Molecular Interactions Controll Vocabulary
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Update search URLs for OLS with the new ones #383

Closed noedelta closed 4 years ago

noedelta commented 7 years ago

From @noedelta on August 1, 2016 9:47

Two terms have the previous URL for OLS. It will stop working in the future, so maybe it is good idea updating them in advance.

[Term] id: MI:0488 name: psi-mi def: "PSI-MI." [PMID:14755292] subset: PSI-MI_slim synonym: "PSI-MI" EXACT PSI-MI-alternate [] xref: id-validation-regexp: "MI:[0-9]{4}" xref: search-url: "http://www.ebi.ac.uk/ontology-lookup/?termId=${ac}" is_a: MI:0444 ! database citation

New URL http://www.ebi.ac.uk/ols/ontologies/mi/terms?obo_id=${ac} Example: http://www.ebi.ac.uk/ols/ontologies/mi/terms?obo_id=MI:0444

[Term] id: MI:1331 name: evidence ontology def: "The Evidence Ontology (ECO) describes types of scientific evidence within the realm of biological research that can arise from laboratory experiments, computational methods, manual literature curation, and other means." [PMID:14755292] subset: PSI-MI_slim synonym: "ECO" RELATED [] xref: id-validation-regexp: "ECO:\d{7}$" xref: search-url: "http://www.ebi.ac.uk/ontology-lookup/?termId=${ac}" is_a: MI:0461 ! interaction database created_by: orchard creation_date: 2014-01-08T12:48:33Z

New URL http://www.ebi.ac.uk/ols/ontologies/eco/terms?obo_id=${ac} Example: http://www.ebi.ac.uk/ols/ontologies/eco/terms?obo_id=ECO:0000302

Copied from original issue: MICommunity/psidev#606