ImportError: Bio.Alphabet 1.78 - Please Help

HadrienG / InSilicoSeq

:rocket: A sequencing simulator

https://insilicoseq.readthedocs.io

MIT License

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ImportError: Bio.Alphabet 1.78 - Please Help #206

Closed slvrshot closed 3 years ago

slvrshot commented 3 years ago

ImportError: Bio.Alphabet has been removed from Biopython. In many cases, the alphabet can simply be ignored and removed from scripts. In a few cases, you may need to specify the molecule_type as an annotation on a SeqRecord for your script to work correctly. Please see https://biopython.org/wiki/Alphabet for more information.

Would you be able to assist in looking into this? Also I cannot debug because any 'iss' command gives the ImportError.

Thanks!

slvrshot commented 3 years ago

Missed the previous tickets! Will attempt upgrading ISS or downgrading biopython.