Open Ackia opened 6 years ago
Looking at https://github.com/rrwick/Basecalling-comparison/blob/master/nanopolish_slurm_wrapper.py there are several improvements that can be made to the polishing. Do we need more options for the user here? Is our polishing to simple? Should we at least use methylation aware polishing right? When using only Nanopore reads.
wip - will check it out
HadrienG
commented
6 years ago HadrienG
commented
6 years ago
Looking at https://github.com/rrwick/Basecalling-comparison/blob/master/nanopolish_slurm_wrapper.py there are several improvements that can be made to the polishing. Do we need more options for the user here? Is our polishing to simple? Should we at least use methylation aware polishing right? When using only Nanopore reads.