issues
search
HadrienG
/
taxadb
:hatching_chick: locally query the ncbi taxonomy
http://taxadb.readthedocs.io/
MIT License
39
stars
16
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Bump tqdm from 4.33.0 to 4.35.0
#51
dependabot-preview[bot]
closed
5 years ago
1
Bump tqdm from 4.33.0 to 4.34.0
#50
dependabot-preview[bot]
closed
5 years ago
2
Bump tqdm from 4.32.2 to 4.33.0
#49
dependabot-preview[bot]
closed
5 years ago
1
0.12.0
#48
HadrienG
closed
5 years ago
1
Bump peewee from 3.8.2 to 3.10.0
#47
dependabot-preview[bot]
closed
5 years ago
1
no rank issue
#46
alienzj
closed
5 years ago
3
Bump tqdm from 4.30.0 to 4.32.2
#45
dependabot-preview[bot]
closed
5 years ago
1
"taxadb query -h" has no useful help?
#44
tseemann
closed
5 years ago
1
Bump peewee from 3.8.2 to 3.9.6
#43
dependabot-preview[bot]
closed
5 years ago
2
Bump requests from 2.21.0 to 2.22.0
#42
dependabot-preview[bot]
closed
5 years ago
1
Bump tqdm from 4.30.0 to 4.32.1
#41
dependabot-preview[bot]
closed
5 years ago
2
Bump peewee from 3.8.2 to 3.9.5
#40
dependabot-preview[bot]
closed
5 years ago
2
New ncbi structure
#39
HadrienG
closed
5 years ago
0
[Security] Bump urllib3 from 1.24.1 to 1.24.2
#38
dependabot-preview[bot]
closed
5 years ago
1
Bump peewee from 2.8.1 to 3.9.4
#37
dependabot-preview[bot]
closed
5 years ago
2
Bump peewee from 2.8.1 to 3.9.3
#36
dependabot-preview[bot]
closed
5 years ago
2
Bump peewee from 2.8.1 to 3.9.2
#35
dependabot-preview[bot]
closed
5 years ago
2
Too many accession entries
#34
StromTroopers
closed
5 years ago
0
Bump tqdm from 4.29.1 to 4.31.1
#33
dependabot-preview[bot]
closed
5 years ago
2
Bump tqdm from 4.29.1 to 4.30.0
#32
dependabot-preview[bot]
closed
5 years ago
2
0.10.0
#31
HadrienG
closed
5 years ago
1
Table taxa does not exist
#30
treitpeter
opened
5 years ago
2
Bump peewee from 2.8.1 to 3.8.2
#29
dependabot-preview[bot]
closed
5 years ago
1
Bump tqdm from 4.25.0 to 4.29.1
#28
dependabot-preview[bot]
closed
5 years ago
1
[Security] Bump requests from 2.19.1 to 2.21.0
#27
dependabot-preview[bot]
closed
5 years ago
1
Bump peewee from 2.8.1 to 3.8.1
#26
dependabot-preview[bot]
closed
5 years ago
2
Lineage
#25
HadrienG
closed
6 years ago
1
Improved progress status output would be helpful
#24
jorvis
closed
6 years ago
7
From taxid to accession number
#23
aghozlane
closed
6 years ago
0
Lineage levels
#22
HadrienG
closed
6 years ago
0
Concurrent access to one db
#21
tbigot
opened
6 years ago
3
scientific name to taxid
#20
HadrienG
closed
6 years ago
1
Allow taxa names as input to obtain the corresponding taxa id
#19
RVanDamme
closed
6 years ago
2
0.7.0
#18
HadrienG
closed
6 years ago
1
Fix sqlite dbname in docs
#17
Erotemic
closed
6 years ago
2
Failure to build sqlite3 database
#16
Erotemic
closed
6 years ago
1
Select files to download
#15
HadrienG
closed
6 years ago
0
URLs broken for SQLite3 databases
#14
jorvis
closed
6 years ago
1
Current DB proposed for download won’t work with current version
#13
tbigot
closed
7 years ago
13
Small updates :)
#12
horkko
closed
7 years ago
1
ERROR: (2014, 'Command Out of Sync') with MySQL
#11
HadrienG
closed
5 years ago
1
Slow db creation
#10
HadrienG
closed
7 years ago
13
Update documentation
#9
HadrienG
closed
7 years ago
4
Docs
#8
HadrienG
closed
7 years ago
0
Docs
#7
HadrienG
closed
7 years ago
1
Object implementation for taxadb
#6
horkko
closed
7 years ago
17
Shouldn’t accessions table be merged in a unique one?
#5
tbigot
closed
7 years ago
2
`too many SQL variables` occurs
#4
tbigot
closed
5 years ago
6
Support for PostgreSQL and database driver creation wrapped
#3
horkko
closed
7 years ago
7
Add error message when md5 doesn't match
#2
HadrienG
closed
6 years ago
0
Previous
Next