Account for Ploidy - Githubissues

HallLab / pandas-genomics

Pandas ExtensionDtypes for dealing with genomics data

BSD 3-Clause "New" or "Revised" License

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Closed jrm5100 closed 4 years ago

jrm5100 commented 4 years ago

The current approach assumes diploid genetic data.

This will require specifying additional Dtypes (probably subclasses of a generic Genotype Dtype) since the data storage will be different.
The functions in GenotypeArray that operate directly on the allele arrays also need to be generalized.