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HazyResearch
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hyena-dna
Official implementation for HyenaDNA, a long-range genomic foundation model built with Hyena
https://arxiv.org/abs/2306.15794
Apache License 2.0
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Question about HyenaDNA working
#28
varuntrivedi18
closed
11 months ago
2
Pre-trained model for genomic benchmarks
#27
alancleary
closed
11 months ago
2
ImportError: Error loading 'src.models.sequence.dna_embedding.DNAEmbeddingModel':
#26
richardsun-voyager
closed
11 months ago
2
Unable to download the Human Reference Genome data
#25
Geraldene
closed
11 months ago
0
Questions on running as module
#24
zhguo9
closed
11 months ago
1
Human Reference Genome questions
#23
kirill-vishniakov
closed
11 months ago
1
Some doubts about downstream tasks
#22
zhguo9
closed
11 months ago
4
Next token prediction - head code location / config to pass
#21
HuangPZ
closed
11 months ago
1
Language model inference
#20
gonzalobenegas
closed
11 months ago
9
nucleotide finetuning
#19
wawpaopao
closed
11 months ago
5
Nucleotide vs codons
#18
KadirErturk4r
closed
1 year ago
3
pretrain model weights miss pos_emb
#17
WalkerSue
closed
1 year ago
6
tokenizer do not padding sequence to same length autoly.
#16
WalkerSue
closed
1 year ago
4
CUDA out of memory with hyena-1m on A100-80G
#15
pone7
closed
1 year ago
6
git-lfs missing from container
#14
KatharinaHoff
closed
10 months ago
12
Fix moving torchmetrics to cuda device 0
#13
awaelchli
closed
1 year ago
0
ICL question
#12
annamykcode
closed
1 year ago
1
several updates
#11
exnx
closed
1 year ago
0
Speed-up Genomic Benchmarks dataloader
#10
cbirchsy
closed
11 months ago
1
Flash Attention 2
#9
dbrami
closed
1 year ago
1
Thank you for doing this, and thank you for open-sourcing it!
#8
Tylersuard
closed
1 year ago
2
flash-attention installment
#7
rohandavidg
closed
1 year ago
3
README update with species
#6
Miking98
closed
1 year ago
0
ImportError: dropout_add_layer_norm is not installed
#5
kunjiefan
closed
1 year ago
3
Fix typo in encoders.py
#4
eltociear
closed
1 year ago
0
Addition to Transformers
#3
tanaymeh
closed
11 months ago
3
Model output changes randomly
#2
swertz
closed
1 year ago
4
fix huggingface links
#1
atgctg
closed
1 year ago
1
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