search

HeliXonProtein / OmegaFold

OmegaFold Release Code
Apache License 2.0
532 stars 75 forks source link

Installing OmegaFold in Ubuntu v22.04 #33

Open biotech70 opened 1 year ago

biotech70 commented 1 year ago

Hi, What is the best version of Python and GCC version to install OmegaFold?

debadutta-patra commented 1 year ago

I am using an Anaconda environment in Ubuntu 22.04 for OmegaFold. Anaconda should provide you most of the dependencies and your GCC version should not be an issue

biotech70 commented 1 year ago

What is the best workflow for installing OmegaFold using the Anaconda environment?

debadutta-patra commented 1 year ago

You can install Anaconda via the installation script from their website. After that, make sure that the conda environment is active, which should be evident from the word "base" in your command prompt. If your conda environment is not active use: conda activate Now you can follow the instructions in the README.md file to install Omegafold, in short use the following commands. pip install git+https://github.com/HeliXonProtein/OmegaFold.git wget https://helixon.s3.amazonaws.com/release1.pt mv release1.pt ~/.cache/omegafold_ckpt/model.pt