HelmholtzAI-Consultants-Munich / napari-organoid-counter

A napari plugin for counting organoids from brightfield microscopy images with deep learning
MIT License
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Detection outside of image #9

Open Theresa-S opened 1 year ago

Theresa-S commented 1 year ago

For some reason the couter found organoids outside of the actual image: image

Does this have something to do with the window size?

Theresa-S commented 1 year ago

PS: the confidence of the boxes is rather low, but I needed to set this parameter low in order to detect certain organoids