search

HenrikBengtsson / TopDom

R package: TopDom - An efficient and Deterministic Method for identifying Topological Domains in Genomes
https://cran.r-project.org/package=TopDom
20 stars 5 forks source link

ROBUSTNESS: Add explicit 'stringsAsFactors' arguments [read.table] #18

Closed HenrikBengtsson closed 4 years ago

HenrikBengtsson commented 4 years ago 
TopDom/R/readHiC.R:    first <- read.table(file, header = FALSE, nrows = 1L)
TopDom/R/readHiC.R:    matrix.data <- read.table(file, colClasses = colClasses, header = FALSE)
TopDom/R/readHiC.R:    matdf <- read.table(file, header = FALSE)
TopDom/R/TopDom_0.0.1.R:    matdf <- read.table(matrix.file, header=F)
TopDom/R/TopDom_0.0.2.R:    matdf <- read.table(matrix.file, header=F)
TopDom/R/TopDom.R:#' @importFrom utils read.table write.table