Read multiple CEL files with output similar to affy::justRMA

HenrikBengtsson / affxparser

🔬 R package: This is the Bioconductor devel version of the affxparser package.

http://bioconductor.org/packages/devel/bioc/html/affxparser.html

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Read multiple CEL files with output similar to affy::justRMA #43

Open drhmoosavi opened 1 year ago

drhmoosavi commented 1 year ago

Hello, Thanks for the work! I have 800 affymetrix HTA 2.0 arrays (gene expression) that I like to read into R with a custom gene-level CDF from brainarray (hta20hsentrezgcdf). How do I do this to get a expression file similar to that of affy::justRMA? also is is possible to set normalization = FALSE when CEL files are being summarized?

Thanks in advance!