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HenrikBengtsson / aroma.seq

🔬 R package: aroma.seq: High-Throughput Sequence Analysis using the Aroma Framework
https://github.com/HenrikBengtsson/aroma.seq
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TESTS: Realign BAM files through BWA #40

Open HenrikBengtsson opened 7 years ago

HenrikBengtsson commented 7 years ago

Add support and tests for realigning a BAM file through BWA, e.g. FQ_1 + FA => BAM_1 and then BAM_1 + FA => BAM_2. Here BAM_1 should be very similar to BAM_2.