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HenrikBengtsson / aroma.seq

🔬 R package: aroma.seq: High-Throughput Sequence Analysis using the Aroma Framework
https://github.com/HenrikBengtsson/aroma.seq
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BamDataFile reports Mb when it should be Gb #8

Closed HenrikBengtsson closed 9 years ago

HenrikBengtsson commented 9 years ago

BamDataFile reports Mb when it should be Gb, e.g.

BamDataFile:
Name: A06929_C019VACXX_6
Tags:
Full name: A06929_C019VACXX_6
Pathname: bamData/LG3-test/HomoSapiens/A06929_C019VACXX_6.bam
File size: 23.75 GB (25498977204 bytes)
RAM: 0.00 MB
Has index file (*.bai): TRUE
Is sorted: TRUE
Number of targets: 25
Total target length: 3.08Mb (3,080,436,051 bases)
Targets: [25] 1, 10, 11, ..., Y
Number of mapped reads: 384,871,187 (94.9%) out of 405,613,942
Number of unmapped reads:  20,742,755 (5.1%) out of 405,613,942
Generated by: (1) 0 v0.5.7