HenrikBengtsson future.BatchJobs issues

HenrikBengtsson / future.BatchJobs

:rocket: R package: future.BatchJobs: A Future API for Parallel and Distributed Processing using BatchJobs [Intentionally archived on CRAN on 2021-01-08]

https://cran.r-project.org/package=future.BatchJobs

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CLEANUP: Drop S3 method await()

#79 HenrikBengtsson closed 3 years ago
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Deprecation of future.BatchJobs package

#78 HenrikBengtsson closed 3 years ago
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CHECKS: Remove folder .future/ created by R CMD check

#77 HenrikBengtsson closed 5 years ago
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Should 'workers = <character>' be allowed?

#76 HenrikBengtsson closed 5 years ago
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BUG: Argument 'workers' cannot be a function

#75 HenrikBengtsson closed 5 years ago
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CLEANUP: Deprecate and defunct

#74 HenrikBengtsson closed 7 years ago
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TESTS: Remove test with future::plan(lazy), which is deprecated and will be defunct soon

#73 HenrikBengtsson closed 7 years ago
1
batchjobs_*(): Add argument `workers` to specify number of workers

#72 HenrikBengtsson closed 7 years ago
1
Error with developers version of BatchJobs (> 1.6)

#71 HenrikBengtsson closed 7 years ago
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job.delay supported on torque cluster?

#70 sorhawell closed 7 years ago
2
Is support for BatchTools planned?

#69 alexvorobiev closed 7 years ago
4
Accept also labels that are not compatible with BatchJobs IDs

#68 HenrikBengtsson closed 8 years ago
1
BatchJobs sometimes returns Error syncing registry... database is locked

#67 alexvorobiev closed 8 years ago
8
VIGNETTE: Mention tweak() using an example

#66 HenrikBengtsson closed 8 years ago
0
Option to turn on the progress bar?

#65 alexvorobiev closed 8 years ago
4
No way to pass resources parameter to SLURM?

#64 alexvorobiev closed 8 years ago
9
SPEED: Polling intervals should be reset when job is launched

#63 HenrikBengtsson opened 8 years ago
0
Make it possible to pass `...` of batchjobs_by_template() to the template environment

#62 HenrikBengtsson closed 8 years ago
1
Implement separate batchjobs future constructors

#61 HenrikBengtsson closed 8 years ago
1
BatchJobs hiccups that we may be able to work around

#60 HenrikBengtsson opened 8 years ago
4
TEST: Test for `backend="multicore"` future gives error on OS X (R 3.2.3)

#59 HenrikBengtsson closed 8 years ago
2
Report also on job output for BatchJobFutureError:s

#58 HenrikBengtsson closed 8 years ago
3
FOR THE RECORD: When TORQUE/PBS kills a job using too much memory it causes a BatchJobs "expiration" error

#57 HenrikBengtsson closed 8 years ago
0
TROUBLESHOOTING: Keep job registry files to simplify troubleshooting

#56 HenrikBengtsson closed 8 years ago
1
BUG: Exported globals are overridden by base and BatchJobs objects

#55 HenrikBengtsson closed 8 years ago
3
CLEANUP: Rename package to future.BatchJobs

#54 HenrikBengtsson closed 8 years ago
0
Future Resources: Make number of tasks a first-class citizen

#53 HenrikBengtsson closed 8 years ago
4
TROUBLESHOOTING: More informative error message than "fatal error occured: 101. qsub produced exit code 27; output qsub: submit error ..."

#52 HenrikBengtsson opened 8 years ago
0
Make BatchJobsFuture self contained, i.e. move away from asyncBatchEvalQ()

#51 HenrikBengtsson closed 8 years ago
0
CLEANUP: Rename BatchJobsAsyncTask to BatchJobsFuture

#50 HenrikBengtsson closed 8 years ago
0
backend() needs to called explicitly to override the default setup when package is loaded

#49 HenrikBengtsson closed 8 years ago
1
Add argument `resources` for BatchJobsAsyncTask

#48 HenrikBengtsson closed 8 years ago
3
Update asyncBatchEvalQ() to handle globals just like future package

#47 HenrikBengtsson closed 8 years ago
2
Update debug option `async::debug` to `future.debug`

#46 HenrikBengtsson closed 8 years ago
0
Add class attibute to batchjobs()

#45 HenrikBengtsson closed 8 years ago
0
Separate .async/ subdirectory for each R session

#44 HenrikBengtsson closed 8 years ago
3
WORKAROUND: Encode variable names before exporting to BatchJobs

#43 HenrikBengtsson closed 9 years ago
1
LIMITATIONS: It is not possible to export globals starting with a period

#42 HenrikBengtsson closed 9 years ago
1
Update batchjobs() to handle `...` the same way lazy() does it

#41 HenrikBengtsson closed 9 years ago
0
%plan% batchjobs(backend=...) does not undo the backend - should it?

#40 HenrikBengtsson closed 9 years ago
0
LIMITATION: It is not possible to export operators, replacement functions etc.

#39 HenrikBengtsson closed 9 years ago
1
Add multicore future based on the 'parallel' package

#38 HenrikBengtsson closed 9 years ago
2
Debugging: Record BatchJobs cluster functions in task object

#37 HenrikBengtsson closed 9 years ago
0
CLEANUP: Drop asyncEvalQ()

#36 HenrikBengtsson closed 9 years ago
0
CLEANUP: Turn BatchJobsAsyncTask() into a simple constructor

#35 HenrikBengtsson closed 9 years ago
0
CLEANUP: Drop makeClusterFunctionsRscript()

#34 HenrikBengtsson closed 9 years ago
0
CLEANUP: Drop async() - use batchjobs() instead

#33 HenrikBengtsson closed 9 years ago
0
CLEANUP: Drop delayedAssign() operator %<-%

#32 HenrikBengtsson closed 9 years ago
0
Rename this package to BatchJobsFuture?

#31 HenrikBengtsson closed 9 years ago
1
Add argument 'backend' to tempRegistry()

#30 HenrikBengtsson closed 9 years ago
0