ROBUSTNESS: Add explicit 'stringsAsFactors' arguments [data.frame]

HenrikBengtsson / illuminaio

🔬 R package: This is the Bioconductor devel version of the illuminaio package.

http://bioconductor.org/packages/devel/bioc/html/illuminaio.html

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ROBUSTNESS: Add explicit 'stringsAsFactors' arguments [data.frame] #13

Closed HenrikBengtsson closed 4 years ago

HenrikBengtsson commented 4 years ago

$ for pkg in $pkgs; do echo "$pkg:"; (cd "$pkg"; grep -E "^[ \t]*[^#].*data[.]frame" -- */*.R | grep -vF stringsAsFactors;); echo; read -r -p "Press ENTER to continue ..."; done

illuminaio:
R/readIDAT_enc.R:            Quants=as.data.frame(data),