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HenriquesLab / ZeroCostDL4Mic

ZeroCostDL4Mic: A Google Colab based no-cost toolbox to explore Deep-Learning in Microscopy
MIT License
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Where to find the requirement file to create a local env #316

Open sebherbert opened 5 months ago

sebherbert commented 5 months ago

Hi all,

Not really a bug, but I'm a bit confused at the documentation. :) This page tells us to download the requirement file from the google drive while running the notebook. I tried, but couldn't get it to install using a pip install -r command in a conda env, there were some libraries that couldn't be found, maybe I missed something... However this page is pointing out that there is a folder dedicated to the requirements txt files. I tried for my notebook (2D Unet) and the install and import are running fine now.

Maybe I completely misunderstood the first page, but I'm thinking it may also be an old approach?

Thanks for all your work :)

Cheers, Sebastien

sebherbert commented 5 months ago

Confirmed that everything works fine with the dedicated requirement file from the requirements page https://github.com/HenriquesLab/ZeroCostDL4Mic/tree/master/requirements_files