search

HenriquesLab / ZeroCostDL4Mic

ZeroCostDL4Mic: A Google Colab based no-cost toolbox to explore Deep-Learning in Microscopy
MIT License
565 stars 129 forks source link

Load dependency error Stardist 2D Colab #327

Closed cshum1 closed 2 months ago

cshum1 commented 2 months ago

There are issues loading the necessary dependencies in section 1.3 of the StarDist_2D_ZeroCostDL4Mic.ipynb notebook when running it in colab on Chrome. This error is new since last week, I'm assuming due to package updates that have sparked incompatibility issues. stardist_colab_dependency_error

Let me know if anyone has suggestions on how to avoid these errors!

guijacquemet commented 2 months ago

Hi,

Thanks for reaching out, the issue was with the GPUtool package. The notebook should be working again.

cshum1 commented 2 months ago

Wonderful, thanks for the quick fix!