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HiDiHlabs
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ovrl.py
A python tool to investigate cell overlaps in imaging-based spatial transcriptomics data.
https://ovrlpy.readthedocs.io
MIT License
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Numpy recursion loop on import
#36
pakiessling
closed
6 hours ago
2
Add scalebar update tutorial Xenium
#35
al3xmlt030
closed
2 weeks ago
0
export scalebar params
#34
niklasmueboe
closed
2 weeks ago
0
Scalebar
#33
niklasmueboe
closed
2 weeks ago
0
updating publication-fixes
#32
sebastiantiesmeyer
closed
2 weeks ago
0
reupload Xenium notebook, fixing JSON formatting error
#31
sebastiantiesmeyer
closed
2 weeks ago
0
ensure generated figures are publication ready-ish
#30
sebastiantiesmeyer
closed
2 weeks ago
0
Publication fixes
#29
sebastiantiesmeyer
closed
2 weeks ago
0
removed Xenium notebook autoreload
#28
sebastiantiesmeyer
closed
1 month ago
0
Dev clean, updated notebook and bug fixes
#27
sebastiantiesmeyer
closed
1 month ago
0
Notebook updates
#26
niklasmueboe
closed
2 weeks ago
0
22 localmax function is doubled up
#25
sebastiantiesmeyer
closed
1 month ago
0
Function and variable names harmonized changed to more comprehensive;…
#24
sebastiantiesmeyer
closed
1 month ago
0
Visualizer attributes documented.
#23
sebastiantiesmeyer
closed
1 month ago
0
localmax function is doubled up
#22
sebastiantiesmeyer
closed
1 month ago
0
Fix naming
#21
sebastiantiesmeyer
closed
1 month ago
0
figure height adaptable for integrity plots, UMAP axes removed
#20
sebastiantiesmeyer
closed
1 month ago
0
Fixed package structure, ovrlp functions are now accessible from main…
#19
sebastiantiesmeyer
closed
1 month ago
0
Fix integrity figure display size
#18
sebastiantiesmeyer
closed
1 month ago
0
cleaned out logging messages
#17
sebastiantiesmeyer
closed
1 month ago
0
fix module structure
#16
sebastiantiesmeyer
closed
1 month ago
0
Fix logging/user output
#15
sebastiantiesmeyer
closed
1 month ago
0
Write attribute documentation for Visualizer
#14
sebastiantiesmeyer
closed
1 month ago
0
updating dev-clean
#13
sebastiantiesmeyer
closed
1 month ago
0
Dev clean
#12
sebastiantiesmeyer
closed
1 month ago
0
Refactorings
#11
niklasmueboe
closed
1 month ago
0
updated Xenium-brain notebook
#10
niklasmueboe
closed
1 month ago
0
Update from dev
#9
niklasmueboe
closed
1 month ago
0
update dev-clean
#8
sebastiantiesmeyer
closed
1 month ago
0
Refactor nmb
#7
sebastiantiesmeyer
closed
1 month ago
0
autapi page per function
#6
sebastiantiesmeyer
closed
1 month ago
0
merging main into dev-clean for contingency
#5
sebastiantiesmeyer
closed
1 month ago
0
Fix readthedocs config
#4
niklasmueboe
closed
1 month ago
0
Update main
#3
niklasmueboe
closed
1 month ago
0
Refactor SSAM2 module
#2
niklasmueboe
closed
1 month ago
0
Packaging
#1
niklasmueboe
closed
1 month ago
0