Something wrong with ATLAS installation in wiki

[popstar0426]

Hi: I followed the installation step (https://github.com/HiFiLES/HiFiLES-solver/wiki/Installing-ATLAS-in-Ubuntu) to install ATLAS in ubuntu 14.04. However, there was something wrong at the ./configure step. My steps are attached below.

airfoil@airfoil-System-Product-Name:~/Desktop/ATLAS_Install$ ls ATLAS atlas3.10.2.tar.bz2 airfoil@airfoil-System-Product-Name:~/Desktop/ATLAS_Install$ mkdir /usr/local/atlas mkdir: cannot create directory ‘/usr/local/atlas’: Permission denied airfoil@airfoil-System-Product-Name:~/Desktop/ATLAS_Install$ sudo mkdir /usr/local/atlas [sudo] password for airfoil: airfoil@airfoil-System-Product-Name:~/Desktop/ATLAS_Install$ cd /usr/local/atlasairfoil@airfoil-System-Product-Name:/usr/local/atlas$ ~/Desktop/ATLAS_Install/ATLAS/./configure touch: cannot touch ‘/usr/local/atlas/TstBld973.txt’: Permission denied rm: cannot remove ‘/usr/local/atlas/TstBld973.txt’: No such file or directory /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: 293: /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: cannot create Makefile: Permission denied /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: 294: /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: cannot create Makefile: Permission denied /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: 295: /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: cannot create Makefile: Permission denied /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: 296: /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: cannot create Makefile: Permission denied /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: 297: /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: cannot create Makefile: Permission denied /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: 298: /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: cannot create Makefile: Permission denied /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: 299: /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: cannot create Makefile: Permission denied /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: 306: /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: cannot create Makefile: Permission denied /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: 307: /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: cannot create Makefile: Permission denied /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: 312: /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: cannot create Makefile: Permission denied /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: 313: /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: cannot create Makefile: Permission denied /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: 314: /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: cannot create Makefile: Permission denied /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: 348: /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: cannot create Makefile: Permission denied /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: 350: /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: cannot create Makefile: Permission denied cp: cannot create regular file ‘./atlcomp.txt’: Permission denied make: Makefile: No such file or directory make: *\ No rule to make target Makefile'. Stop. ./xconfig -d s /home/airfoil/Desktop/ATLAS_Install/ATLAS/./ -d b /usr/local/atlas /bin/sh: 1: ./xconfig: not found xconfig exited with 127 airfoil@airfoil-System-Product-Name:/usr/local/atlas$ sudo ~/Desktop/ATLAS_Install/ATLAS/./configure gcc -I/home/airfoil/Desktop/ATLAS_Install/ATLAS/.//CONFIG/include -g -w -c /home/airfoil/Desktop/ATLAS_Install/ATLAS/.//CONFIG/src/atlconf_misc.c gcc -I/home/airfoil/Desktop/ATLAS_Install/ATLAS/.//CONFIG/include -g -w -o xconfig /home/airfoil/Desktop/ATLAS_Install/ATLAS/.//CONFIG/src/config.c atlconf_misc.o /tmp/ccUrWCj6.o: In functionATL_tmpnam': /home/airfoil/Desktop/ATLAS_Install/ATLAS/.//CONFIG/include/atlas_sys.h:224: warning: the use of tmpnam' is dangerous, better usemkstemp' ./xconfig -d s /home/airfoil/Desktop/ATLAS_Install/ATLAS/./ -d b /usr/local/atlas probe_OS.o: In function ATL_tmpnam': /home/airfoil/Desktop/ATLAS_Install/ATLAS/.//CONFIG/include/atlas_sys.h:224: warning: the use oftmpnam' is dangerous, better use `mkstemp'

OS configured as Linux (1) probe_asm.o: In function ATL_tmpnam': /home/airfoil/Desktop/ATLAS_Install/ATLAS/.//CONFIG/include/atlas_sys.h:224: warning: the use oftmpnam' is dangerous, better use `mkstemp'

Assembly configured as GAS_x8664 (2) probe_vec.o: In function ATL_tmpnam': /home/airfoil/Desktop/ATLAS_Install/ATLAS/.//CONFIG/include/atlas_sys.h:224: warning: the use oftmpnam' is dangerous, better use `mkstemp'

Vector ISA Extension configured as SSE3 (6,448) probe_arch.o: In function ATL_tmpnam': /home/airfoil/Desktop/ATLAS_Install/ATLAS/.//CONFIG/include/atlas_sys.h:224: warning: the use oftmpnam' is dangerous, better use mkstemp' /tmp/cckawNcV.o: In functionATL_tmpnam': /home/airfoil/Desktop/ATLAS_Install/ATLAS/.//CONFIG/include/atlas_sys.h:224: warning: the use of tmpnam' is dangerous, better usemkstemp'

Architecture configured as Corei1 (26) /tmp/cccw1Dpg.o: In function ATL_tmpnam': /home/airfoil/Desktop/ATLAS_Install/ATLAS/.//CONFIG/include/atlas_sys.h:224: warning: the use oftmpnam' is dangerous, better use `mkstemp'

Clock rate configured as 2801Mhz

Maximum number of threads configured as 8 probe_pmake.o: In function ATL_tmpnam': /home/airfoil/Desktop/ATLAS_Install/ATLAS/.//CONFIG/include/atlas_sys.h:224: warning: the use oftmpnam' is dangerous, better use mkstemp' Parallel make command configured as '$(MAKE) -j 8' Cannot detect CPU throttling. gcc -I/home/airfoil/Desktop/ATLAS_Install/ATLAS/.//CONFIG/include -g -w -o xisgcc /home/airfoil/Desktop/ATLAS_Install/ATLAS/.//CONFIG/src/IsGcc.c atlconf_misc.o /tmp/ccoZEjGy.o: In functionATL_tmpnam': /home/airfoil/Desktop/ATLAS_Install/ATLAS/.//CONFIG/include/atlas_sys.h:224: warning: the use of tmpnam' is dangerous, better usemkstemp' gcc -I/home/airfoil/Desktop/ATLAS_Install/ATLAS/.//CONFIG/include -g -w -c /home/airfoil/Desktop/ATLAS_Install/ATLAS/.//CONFIG/src/probe_comp.c gcc -I/home/airfoil/Desktop/ATLAS_Install/ATLAS/.//CONFIG/include -g -w -o xprobe_comp probe_comp.o atlconf_misc.o probe_comp.o: In function ATL_tmpnam': /home/airfoil/Desktop/ATLAS_Install/ATLAS/.//CONFIG/include/atlas_sys.h:224: warning: the use oftmpnam' is dangerous, better use mkstemp' rm -f config1.out make atlas_run atldir=/usr/local/atlas exe=xprobe_comp redir=config1.out \ args="-v 0 -o atlconf.txt -O 1 -A 26 -Si nof77 0 -V 448 -b 64 -d b /usr/local/atlas" make[1]: Entering directory/usr/local/atlas' cd /usr/local/atlas ; ./xprobe_comp -v 0 -o atlconf.txt -O 1 -A 26 -Si nof77 0 -V 448 -b 64 -d b /usr/local/atlas > config1.out make[2]: gfortran: Command not found make[2]: * [IRunF77Comp] Error 127 make[2]: g77: Command not found make[2]: * [IRunF77Comp] Error 127 make[2]: f77: Command not found make[2]: *\ [IRunF77Comp] Error 127

Unable to find usable compiler for F77; abortingMake sure compilers are in your path, and specify good compilers to configure (see INSTALL.txt or 'configure --help' for details)make[1]: * [atlas_run] Error 8 make[1]: Leaving directory /usr/local/atlas' make: *** [IRun_comp] Error 2 ERROR 512 IN SYSCMND: 'make IRun_comp args="-v 0 -o atlconf.txt -O 1 -A 26 -Si nof77 0 -V 448 -b 64"' mkdir src bin tune interfaces cd src ; mkdir testing auxil blas lapack pthreads threads cd src/blas ; \ mkdir f77reference reference gemv ger gemm kbmm \ level1 level2 level3 pklevel3 cd src/blas/reference ; mkdir level1 level2 level3 cd src/blas/level2 ; mkdir kernel cd src/blas/pklevel3 ; mkdir gpmm sprk cd src/blas/level3 ; mkdir rblas kernel cd src/pthreads ; mkdir blas misc cd src/pthreads/blas ; mkdir level1 level2 level3 cd src/threads ; mkdir blas lapack cd src/threads/blas ; mkdir level3 level2 cd tune ; mkdir blas sysinfo lapack threads cd tune/blas ; mkdir gemm gemv ger level1 level3 cd interfaces ; mkdir blas lapack cd interfaces/lapack ; mkdir C F77 cd interfaces/lapack/C ; mkdir src testing cd interfaces/lapack/F77 ; mkdir src testing cd interfaces/blas ; mkdir C F77 cd interfaces/blas/C ; mkdir src testing cd interfaces/blas/F77 ; mkdir src testing cd interfaces/lapack ; mkdir C2F cd interfaces/lapack/C2F ; mkdir src mkdir ARCHS make -f Make.top startup make[1]: Entering directory/usr/local/atlas' Make.top:1: Make.inc: No such file or directory Make.top:325: warning: overriding commands for target /AtlasTest' Make.top:76: warning: ignoring old commands for target/AtlasTest' make[1]: *\ No rule to make target Make.inc'. Stop. make[1]: Leaving directory/usr/local/atlas' make: * [startup] Error 2 mv: cannot stat ‘lib/Makefile’: No such file or directory /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: 450: /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: cannot create lib/Makefile: Directory nonexistent /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: 451: /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: cannot create lib/Makefile: Directory nonexistent /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: 452: /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: cannot create lib/Makefile: Directory nonexistent /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: 453: /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: cannot create lib/Makefile: Directory nonexistent /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: 509: /home/airfoil/Desktop/ATLAS_Install/ATLAS/./configure: cannot create lib/Makefile: Directory nonexistent DONE configure

[JacobCrabill]

When it says "Permission Denied" that means you need sudo access to the system. You can't install things to protected directories like /usr/local/ without admin access.