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HingeAssembler / HINGE

Software accompanying "HINGE: Long-Read Assembly Achieves Optimal Repeat Resolution"
http://genome.cshlp.org/content/27/5/747.full.pdf+html?sid=39918b0d-7a7d-4a12-b720-9238834902fd
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HINGE, Oxford Nanopore, E. coli, 23X coverage, almost closed assembly #107

Open alimayy opened 7 years ago

alimayy commented 7 years ago

Hi guys,

Just wanted to let you know that last week I used HINGE with low-coverage parameters suggested by Ilan here on 9,567 MinIon reads (min. length 8 Kb), and at 23X coverage I was able to get a full size assembly of 3 contigs (E. coli, 4,4 Mb). This is very promising!

Ali