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Hocking-Lab / cocanal-turtles

Files related to analysis of turtle data from the Chesapeake and Ohio Canal
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Error in vectorization of logit function #11

Open nthaydt opened 5 years ago

nthaydt commented 5 years ago

commit: 6273ccd30cca281d440027710296561c7e977daf path: Code/BehavioralModel.R

The error seems to occur around line 37 in the model -> logit(p0[i, j, k, t]) <- alpha0[k, t] + (alpha2*C[i,k]) + eta[i,k]

I'm having trouble inserting the Cik matrix into the logit function and keep getting the following error: Error in checkForRemoteErrors(lapply(cl, recvResult)) : 3 nodes produced errors; first error: RUNTIME ERROR: Invalid vector argument to ilogit

JAGS doesn't seem to accept the vector provided with the logit function. Creating my own logit function was mentioned as a possible fix.

djhocking commented 5 years ago

Fixed the indexing associated with alpha2. However, I think rather than by individual and day it should just be by individual at most.

nthaydt commented 5 years ago

Yeah, I agree with that. I think making behavior vary by day is too much...

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On Feb 28, 2019, at 12:16 PM, Daniel J. Hocking notifications@github.com<mailto:notifications@github.com> wrote:

Fixed the indexing associated with alpha2. However, I think rather than by individual and day it should just be by individual at most.

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