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Pymol crashes on startup on Mac OS 10.11.6 #2956

Closed byamal closed 7 years ago

byamal commented 7 years ago

Pymol crashes when I try to open it. The terminal output is:

$pymol

PyMOL(TM) Molecular Graphics System, Version 1.8.4.0. Copyright (c) Schrodinger, LLC. All Rights Reserved.

Created by Warren L. DeLano, Ph.D.

PyMOL is user-supported open-source software. Although some versions are freely available, PyMOL is not in the public domain.

If PyMOL is helpful in your work or study, then please volunteer support for our ongoing efforts to create open and affordable scientific software by purchasing a PyMOL Maintenance and/or Support subscription.

More information can be found at "http://www.pymol.org".

Enter "help" for a list of commands. Enter "help " for information on a specific command. Hit ESC anytime to toggle between text and graphics.

Detected OpenGL version 2.0 or greater. Shaders available. Detected GLSL version 1.20. OpenGL graphics engine: GL_VENDOR: ATI Technologies Inc. GL_RENDERER: AMD Radeon R9 M370X OpenGL Engine GL_VERSION: 2.1 ATI-1.42.15 Detected 8 CPU cores. Enabled multithreaded rendering. /usr/local/bin/pymol: line 4: 72340 Terminated: 15 "/usr/local/opt/python/bin/python2.7" "/usr/local/Cellar/pymol/1.8.4.0/libexec/lib/python2.7/site-packages/pymol/init.py" "$@"

byamal commented 7 years ago

The output for $ brew gist-logs tcl-tk https://gist.github.com/0817e94cf8ed4f70f15e4ddc0b397e0e

The output for $ brew gist-logs python https://gist.github.com/d475d611ed4c4811e04588cc1bb28af2

The output for $ brew gist-logs pymol Error: No logs.

fxcoudert commented 7 years ago

This is a homebrew-science issue, which is tracked there: https://github.com/Homebrew/homebrew-science/issues/5505