A comprehensive and full-featured computational physics suite for boundary-element analysis of electromagnetic scattering, fluctuation-induced phenomena (Casimir forces and radiative heat transfer), nanophotonics, RF device engineering, electrostatics, and more. Includes a core library with C++ and python APIs as well as many command-line applications.
As it mentioned, it should have output files when the calculation done. In my case, there are no output files such as NanoBeam_1006.out . I am new to scuff-em and I have no idea about how to fix this?
Thanks!
Jin
Please see the log file as following:
03/27/19::13:15:51: scuff-caspol running on heavylift-14:21135 (03/27/19::13:15:51)
03/27/19::13:15:51: Adding lattice basis vector (0.367,0,0).
03/27/19::13:15:51: Opened mesh file .//
03/27/19::13:15:51: Mem before straddlers: 227
03/27/19::13:15:51: Surface Nanobeam:
03/27/19::13:15:51: 38 straddlers normal to lattice vector #0
03/27/19::13:15:51: 38 total straddlers
03/27/19::13:15:51: Surface Nanobeam: {Straddlers, ExteriorEdges}={38,38} {closed}
03/27/19::13:15:51: Flipped 655 panel normals to comport with region definitions.
03/27/19::13:15:51: FC::P could not open file NanoBeamUnitCell_1006.scuffcache (skipping cache preload)
03/27/19::13:15:51: Trying to allocate accelerator for (0,0) matrix-block assembly...
03/27/19::13:15:51: ...success!
03/27/19::13:15:51: Evaluating BZ integral by
03/27/19::13:15:51: Clenshaw-Curtis cubature, order 21: 03/27/19::13:15:51: Computing full zero-temperature Casimir-Polder potentials.
/home/iqclabh/scuff-em-installation/lib/libscuff.so.0(+0x90659)[0x7f2f71a45659]
/lib/x86_64-linux-gnu/libc.so.6(+0x3ef20)[0x7f2f71061f20]
/home/iqclabh/scuff-em-installation/lib/libscuff.so.0(_ZN7MatProp8GetEpsMuESt7complexIdEPS1S2+0x1e)[0x7f2f71a73fce]
/home/iqclabh/scuff-em-installation/lib/libscuff.so.0(_ZN7MatProp6GetEpsESt7complexIdE+0x39)[0x7f2f71a74269]
scuff-caspol(+0x4a71)[0x5568d21a6a71]
scuff-caspol(+0x4069)[0x5568d21a6069]
scuff-caspol(+0x4540)[0x5568d21a6540]
/home/iqclabh/scuff-em-installation/lib/libscuff.so.0(+0xa3d27)[0x7f2f71a58d27]
/home/iqclabh/scuff-em-installation/lib/libscuff.so.0(+0xa4157)[0x7f2f71a59157]
/home/iqclabh/scuff-em-installation/lib/libscuff.so.0(+0xa404b)[0x7f2f71a5904b]
/home/iqclabh/scuff-em-installation/lib/libscuff.so.0(+0xa433b)[0x7f2f71a5933b]
/home/iqclabh/scuff-em-installation/lib/libscuff.so.0(pcubature_v_buf+0x2da)[0x7f2f71a5978a]
/home/iqclabh/scuff-em-installation/lib/libscuff.so.0(pcubature_log+0xe0)[0x7f2f71a5a3a0]
scuff-caspol(+0x355a)[0x5568d21a555a]
scuff-caspol(+0x244a)[0x5568d21a444a]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xe7)[0x7f2f71044b97]
scuff-caspol(+0x28da)[0x5568d21a48da]
**<><> received signal 11
03/29/19::12:59:36: scuff-caspol running on heavylift-14:16227 (03/29/19::12:59:36)
03/29/19::12:59:36: Adding lattice basis vector (0.367,0,0).
03/29/19::12:59:36: Opened mesh file .//
03/29/19::12:59:36: Mem before straddlers: 227
03/29/19::12:59:36: Surface Nanobeam:
03/29/19::12:59:36: 38 straddlers normal to lattice vector #0
03/29/19::12:59:36: 38 total straddlers
03/29/19::12:59:36: Surface Nanobeam: {Straddlers, ExteriorEdges}={38,38} {closed}
03/29/19::12:59:36: Flipped 655 panel normals to comport with region definitions.
03/29/19::12:59:36: FC::P could not open file NanoBeamUnitCell_1006.scuffcache (skipping cache preload)
03/29/19::12:59:36: Trying to allocate accelerator for (0,0) matrix-block assembly...
03/29/19::12:59:36: ...success!
03/29/19::12:59:36: Evaluating BZ integral by
03/29/19::12:59:36: Clenshaw-Curtis cubature, order 21: 03/29/19::12:59:36: Computing full zero-temperature Casimir-Polder potentials.
/home/iqclabh/scuff-em-installation/lib/libscuff.so.0(+0x90659)[0x7f71731b0659]
/lib/x86_64-linux-gnu/libc.so.6(+0x3ef20)[0x7f71727ccf20]
/home/iqclabh/scuff-em-installation/lib/libscuff.so.0(_ZN7MatProp8GetEpsMuESt7complexIdEPS1S2+0x1e)[0x7f71731defce]
/home/iqclabh/scuff-em-installation/lib/libscuff.so.0(_ZN7MatProp6GetEpsESt7complexIdE+0x39)[0x7f71731df269]
scuff-caspol(+0x4a71)[0x55598e1dba71]
scuff-caspol(+0x4069)[0x55598e1db069]
scuff-caspol(+0x4540)[0x55598e1db540]
/home/iqclabh/scuff-em-installation/lib/libscuff.so.0(+0xa3d27)[0x7f71731c3d27]
/home/iqclabh/scuff-em-installation/lib/libscuff.so.0(+0xa4157)[0x7f71731c4157]
/home/iqclabh/scuff-em-installation/lib/libscuff.so.0(+0xa404b)[0x7f71731c404b]
/home/iqclabh/scuff-em-installation/lib/libscuff.so.0(+0xa433b)[0x7f71731c433b]
/home/iqclabh/scuff-em-installation/lib/libscuff.so.0(pcubature_v_buf+0x2da)[0x7f71731c478a]
/home/iqclabh/scuff-em-installation/lib/libscuff.so.0(pcubature_log+0xe0)[0x7f71731c53a0]
scuff-caspol(+0x355a)[0x55598e1da55a]
scuff-caspol(+0x244a)[0x55598e1d944a]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xe7)[0x7f71727afb97]
scuff-caspol(+0x28da)[0x55598e1d98da]
Dear Homer,
I am running the following example to calculate the Casimir-Polder potentials.
http://homerreid.github.io/scuff-em documentation/examples/NanostructureCasimirPolder/NanostructureCasimirPolder/
As it mentioned, it should have output files when the calculation done. In my case, there are no output files such as NanoBeam_1006.out . I am new to scuff-em and I have no idea about how to fix this?
Thanks! Jin
Please see the log file as following:
03/27/19::13:15:51: scuff-caspol running on heavylift-14:21135 (03/27/19::13:15:51) 03/27/19::13:15:51: Adding lattice basis vector (0.367,0,0). 03/27/19::13:15:51: Opened mesh file .// 03/27/19::13:15:51: Mem before straddlers: 227 03/27/19::13:15:51: Surface Nanobeam: 03/27/19::13:15:51: 38 straddlers normal to lattice vector #0 03/27/19::13:15:51: 38 total straddlers 03/27/19::13:15:51: Surface Nanobeam: {Straddlers, ExteriorEdges}={38,38} {closed} 03/27/19::13:15:51: Flipped 655 panel normals to comport with region definitions. 03/27/19::13:15:51: FC::P could not open file NanoBeamUnitCell_1006.scuffcache (skipping cache preload) 03/27/19::13:15:51: Trying to allocate accelerator for (0,0) matrix-block assembly... 03/27/19::13:15:51: ...success! 03/27/19::13:15:51: Evaluating BZ integral by 03/27/19::13:15:51: Clenshaw-Curtis cubature, order 21: 03/27/19::13:15:51: Computing full zero-temperature Casimir-Polder potentials. /home/iqclabh/scuff-em-installation/lib/libscuff.so.0(+0x90659)[0x7f2f71a45659] /lib/x86_64-linux-gnu/libc.so.6(+0x3ef20)[0x7f2f71061f20] /home/iqclabh/scuff-em-installation/lib/libscuff.so.0(_ZN7MatProp8GetEpsMuESt7complexIdEPS1S2+0x1e)[0x7f2f71a73fce] /home/iqclabh/scuff-em-installation/lib/libscuff.so.0(_ZN7MatProp6GetEpsESt7complexIdE+0x39)[0x7f2f71a74269] scuff-caspol(+0x4a71)[0x5568d21a6a71] scuff-caspol(+0x4069)[0x5568d21a6069] scuff-caspol(+0x4540)[0x5568d21a6540] /home/iqclabh/scuff-em-installation/lib/libscuff.so.0(+0xa3d27)[0x7f2f71a58d27] /home/iqclabh/scuff-em-installation/lib/libscuff.so.0(+0xa4157)[0x7f2f71a59157] /home/iqclabh/scuff-em-installation/lib/libscuff.so.0(+0xa404b)[0x7f2f71a5904b] /home/iqclabh/scuff-em-installation/lib/libscuff.so.0(+0xa433b)[0x7f2f71a5933b] /home/iqclabh/scuff-em-installation/lib/libscuff.so.0(pcubature_v_buf+0x2da)[0x7f2f71a5978a] /home/iqclabh/scuff-em-installation/lib/libscuff.so.0(pcubature_log+0xe0)[0x7f2f71a5a3a0] scuff-caspol(+0x355a)[0x5568d21a555a] scuff-caspol(+0x244a)[0x5568d21a444a] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xe7)[0x7f2f71044b97] scuff-caspol(+0x28da)[0x5568d21a48da]
**<><> received signal 11
03/29/19::12:59:36: scuff-caspol running on heavylift-14:16227 (03/29/19::12:59:36) 03/29/19::12:59:36: Adding lattice basis vector (0.367,0,0). 03/29/19::12:59:36: Opened mesh file .// 03/29/19::12:59:36: Mem before straddlers: 227 03/29/19::12:59:36: Surface Nanobeam: 03/29/19::12:59:36: 38 straddlers normal to lattice vector #0 03/29/19::12:59:36: 38 total straddlers 03/29/19::12:59:36: Surface Nanobeam: {Straddlers, ExteriorEdges}={38,38} {closed} 03/29/19::12:59:36: Flipped 655 panel normals to comport with region definitions. 03/29/19::12:59:36: FC::P could not open file NanoBeamUnitCell_1006.scuffcache (skipping cache preload) 03/29/19::12:59:36: Trying to allocate accelerator for (0,0) matrix-block assembly... 03/29/19::12:59:36: ...success! 03/29/19::12:59:36: Evaluating BZ integral by 03/29/19::12:59:36: Clenshaw-Curtis cubature, order 21: 03/29/19::12:59:36: Computing full zero-temperature Casimir-Polder potentials. /home/iqclabh/scuff-em-installation/lib/libscuff.so.0(+0x90659)[0x7f71731b0659] /lib/x86_64-linux-gnu/libc.so.6(+0x3ef20)[0x7f71727ccf20] /home/iqclabh/scuff-em-installation/lib/libscuff.so.0(_ZN7MatProp8GetEpsMuESt7complexIdEPS1S2+0x1e)[0x7f71731defce] /home/iqclabh/scuff-em-installation/lib/libscuff.so.0(_ZN7MatProp6GetEpsESt7complexIdE+0x39)[0x7f71731df269] scuff-caspol(+0x4a71)[0x55598e1dba71] scuff-caspol(+0x4069)[0x55598e1db069] scuff-caspol(+0x4540)[0x55598e1db540] /home/iqclabh/scuff-em-installation/lib/libscuff.so.0(+0xa3d27)[0x7f71731c3d27] /home/iqclabh/scuff-em-installation/lib/libscuff.so.0(+0xa4157)[0x7f71731c4157] /home/iqclabh/scuff-em-installation/lib/libscuff.so.0(+0xa404b)[0x7f71731c404b] /home/iqclabh/scuff-em-installation/lib/libscuff.so.0(+0xa433b)[0x7f71731c433b] /home/iqclabh/scuff-em-installation/lib/libscuff.so.0(pcubature_v_buf+0x2da)[0x7f71731c478a] /home/iqclabh/scuff-em-installation/lib/libscuff.so.0(pcubature_log+0xe0)[0x7f71731c53a0] scuff-caspol(+0x355a)[0x55598e1da55a] scuff-caspol(+0x244a)[0x55598e1d944a] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xe7)[0x7f71727afb97] scuff-caspol(+0x28da)[0x55598e1d98da]
**<><> received signal 11