Query regarding ratio in config.yaml

Hoohm / dropSeqPipe

A SingleCell RNASeq pre-processing snakemake workflow

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Query regarding ratio in config.yaml #104

Open rjg2186 opened 4 years ago

rjg2186 commented 4 years ago

Hi @Hoohm

I am trying to run the pipeline using reads obtained from 1:1 mixture of human and mouse cell. How does the ratio in yaml needs to be justified ? I can see 0.2 in tutorial. Does it depend on experiment ?

Any inputs/thoughts in this is highly appreciated.

Thanks.